Protein–RNA interactions for Protein: O89086

Rbm3, RNA-binding protein 3, mousemouse

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm3O89086 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
Rbm3O89086 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC10.69□□□□□ -0.7
Rbm3O89086 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC10.69□□□□□ -0.7
Rbm3O89086 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rbm3O89086 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC10.69□□□□□ -0.7
Rbm3O89086 Spcs1-204ENSMUST00000226782 949 ntBASIC10.69□□□□□ -0.7
Rbm3O89086 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.69□□□□□ -0.7
Rbm3O89086 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rbm3O89086 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Rbm3O89086 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC10.68□□□□□ -0.7
Rbm3O89086 Gm22238-201ENSMUST00000175222 88 ntBASIC10.68□□□□□ -0.7
Rbm3O89086 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rbm3O89086 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rbm3O89086 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rbm3O89086 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.67□□□□□ -0.7
Rbm3O89086 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rbm3O89086 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.67□□□□□ -0.7
Rbm3O89086 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC10.67□□□□□ -0.7
Rbm3O89086 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rbm3O89086 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms