Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Setdb1O88974 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Gm11336-201ENSMUST00000118168 334 ntBASIC20.31■□□□□ 0.84
Setdb1O88974 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Setdb1O88974 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Setdb1O88974 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Setdb1O88974 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Setdb1O88974 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Setdb1O88974 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Setdb1O88974 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Setdb1O88974 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Setdb1O88974 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.31■□□□□ 0.84
Setdb1O88974 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Gm6376-201ENSMUST00000209407 580 ntBASIC20.3■□□□□ 0.84
Setdb1O88974 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.3■□□□□ 0.84
Setdb1O88974 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Setdb1O88974 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.29■□□□□ 0.84
Setdb1O88974 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.29■□□□□ 0.84
Setdb1O88974 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Setdb1O88974 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Setdb1O88974 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.29■□□□□ 0.84
Setdb1O88974 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.29■□□□□ 0.84
Setdb1O88974 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.29■□□□□ 0.84
Setdb1O88974 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Setdb1O88974 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Setdb1O88974 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Setdb1O88974 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Setdb1O88974 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.28■□□□□ 0.84
Setdb1O88974 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.28■□□□□ 0.84
Setdb1O88974 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Setdb1O88974 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Setdb1O88974 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.28■□□□□ 0.84
Setdb1O88974 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Setdb1O88974 Gm4995-201ENSMUST00000117247 432 ntBASIC20.27■□□□□ 0.84
Setdb1O88974 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.27■□□□□ 0.84
Setdb1O88974 Gm6736-201ENSMUST00000166583 948 ntBASIC20.27■□□□□ 0.84
Setdb1O88974 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.27■□□□□ 0.84
Setdb1O88974 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Gm10060-201ENSMUST00000212002 111 ntBASIC20.27■□□□□ 0.84
Setdb1O88974 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.27■□□□□ 0.84
Setdb1O88974 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Setdb1O88974 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Setdb1O88974 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Setdb1O88974 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Setdb1O88974 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Setdb1O88974 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Setdb1O88974 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Setdb1O88974 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Setdb1O88974 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Setdb1O88974 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.27■□□□□ 0.83
Setdb1O88974 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Setdb1O88974 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms