Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Olfr129-201ENSMUST00000122318 993 ntBASIC21.68■■□□□ 1.06
Apaf1O88879 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.68■■□□□ 1.06
Apaf1O88879 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.68■■□□□ 1.06
Apaf1O88879 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Apaf1O88879 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.68■■□□□ 1.06
Apaf1O88879 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.67■■□□□ 1.06
Apaf1O88879 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Apaf1O88879 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Gm15794-201ENSMUST00000120182 631 ntBASIC21.67■■□□□ 1.06
Apaf1O88879 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.67■■□□□ 1.06
Apaf1O88879 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Apaf1O88879 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Apaf1O88879 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.66■■□□□ 1.06
Apaf1O88879 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Apaf1O88879 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.66■■□□□ 1.06
Apaf1O88879 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Apaf1O88879 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Apaf1O88879 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Apaf1O88879 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Apaf1O88879 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Apaf1O88879 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Gm14859-201ENSMUST00000117752 357 ntBASIC21.65■■□□□ 1.06
Apaf1O88879 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Apaf1O88879 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Apaf1O88879 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Apaf1O88879 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Apaf1O88879 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Apaf1O88879 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
Apaf1O88879 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.64■■□□□ 1.06
Apaf1O88879 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 Gm27742-201ENSMUST00000184667 60 ntBASIC21.64■■□□□ 1.05
Apaf1O88879 Gm45328-201ENSMUST00000210942 917 ntBASIC21.64■■□□□ 1.05
Apaf1O88879 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Apaf1O88879 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.63■■□□□ 1.05
Apaf1O88879 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Apaf1O88879 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Apaf1O88879 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Apaf1O88879 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms