Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cops6O88545 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
Cops6O88545 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
Cops6O88545 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.33■□□□□ 0.85
Cops6O88545 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.33■□□□□ 0.85
Cops6O88545 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.33■□□□□ 0.85
Cops6O88545 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.33■□□□□ 0.85
Cops6O88545 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cops6O88545 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cops6O88545 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cops6O88545 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cops6O88545 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.32■□□□□ 0.84
Cops6O88545 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.32■□□□□ 0.84
Cops6O88545 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.32■□□□□ 0.84
Cops6O88545 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cops6O88545 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Cops6O88545 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.32■□□□□ 0.84
Cops6O88545 Gm15165-201ENSMUST00000118140 502 ntBASIC20.32■□□□□ 0.84
Cops6O88545 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.32■□□□□ 0.84
Cops6O88545 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.32■□□□□ 0.84
Cops6O88545 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cops6O88545 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cops6O88545 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cops6O88545 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cops6O88545 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops6O88545 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops6O88545 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops6O88545 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.31■□□□□ 0.84
Cops6O88545 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.31■□□□□ 0.84
Cops6O88545 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops6O88545 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.31■□□□□ 0.84
Cops6O88545 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cops6O88545 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Cops6O88545 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.31■□□□□ 0.84
Cops6O88545 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cops6O88545 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Cops6O88545 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.3■□□□□ 0.84
Cops6O88545 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.3■□□□□ 0.84
Cops6O88545 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.3■□□□□ 0.84
Cops6O88545 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.3■□□□□ 0.84
Cops6O88545 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cops6O88545 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Cops6O88545 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cops6O88545 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cops6O88545 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cops6O88545 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cops6O88545 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cops6O88545 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.28■□□□□ 0.84
Cops6O88545 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.28■□□□□ 0.84
Cops6O88545 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Cops6O88545 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cops6O88545 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cops6O88545 Rarb-207ENSMUST00000225921 2756 ntBASIC20.28■□□□□ 0.84
Cops6O88545 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cops6O88545 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cops6O88545 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cops6O88545 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cops6O88545 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.27■□□□□ 0.84
Cops6O88545 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms