Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Cops3O88543 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cops3O88543 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cops3O88543 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.96□□□□□ -0.01
Cops3O88543 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.96□□□□□ -0.01
Cops3O88543 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops3O88543 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cops3O88543 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Cops3O88543 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops3O88543 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops3O88543 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops3O88543 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.96□□□□□ -0.02
Cops3O88543 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops3O88543 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops3O88543 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.95□□□□□ -0.02
Cops3O88543 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.95□□□□□ -0.02
Cops3O88543 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.95□□□□□ -0.02
Cops3O88543 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Cops3O88543 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cops3O88543 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.95□□□□□ -0.02
Cops3O88543 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.95□□□□□ -0.02
Cops3O88543 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cops3O88543 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.95□□□□□ -0.02
Cops3O88543 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops3O88543 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cops3O88543 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Cops3O88543 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.94□□□□□ -0.02
Cops3O88543 Gm18666-201ENSMUST00000190039 958 ntBASIC14.94□□□□□ -0.02
Cops3O88543 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cops3O88543 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cops3O88543 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cops3O88543 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cops3O88543 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cops3O88543 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops3O88543 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.93□□□□□ -0.02
Cops3O88543 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cops3O88543 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.93□□□□□ -0.02
Cops3O88543 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.93□□□□□ -0.02
Cops3O88543 Gm12441-201ENSMUST00000121806 588 ntBASIC14.93□□□□□ -0.02
Cops3O88543 Gm17661-201ENSMUST00000170317 270 ntBASIC14.93□□□□□ -0.02
Cops3O88543 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms