Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Gm7213-201ENSMUST00000215977 950 ntBASIC16.76■□□□□ 0.27
Dnmt3aO88508 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dnmt3aO88508 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.75■□□□□ 0.27
Dnmt3aO88508 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.75■□□□□ 0.27
Dnmt3aO88508 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.75■□□□□ 0.27
Dnmt3aO88508 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.75■□□□□ 0.27
Dnmt3aO88508 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.75■□□□□ 0.27
Dnmt3aO88508 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dnmt3aO88508 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.74■□□□□ 0.27
Dnmt3aO88508 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dnmt3aO88508 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Haglr-201ENSMUST00000100000 2085 ntBASIC16.73■□□□□ 0.27
Dnmt3aO88508 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.73■□□□□ 0.27
Dnmt3aO88508 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.73■□□□□ 0.27
Dnmt3aO88508 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Mir1668-201ENSMUST00000184114 107 ntBASIC16.73■□□□□ 0.27
Dnmt3aO88508 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Dnmt3aO88508 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Dnmt3aO88508 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Gm22697-201ENSMUST00000175194 63 ntBASIC16.72■□□□□ 0.27
Dnmt3aO88508 Gm18032-201ENSMUST00000222541 538 ntBASIC16.72■□□□□ 0.27
Dnmt3aO88508 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.72■□□□□ 0.27
Dnmt3aO88508 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms