Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.68■□□□□ 0.74
Slc4a4O88343 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Slc4a4O88343 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Slc4a4O88343 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc4a4O88343 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc4a4O88343 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Slc4a4O88343 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slc4a4O88343 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc4a4O88343 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc4a4O88343 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc4a4O88343 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.66■□□□□ 0.74
Slc4a4O88343 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Slc4a4O88343 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Slc4a4O88343 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc4a4O88343 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc4a4O88343 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Slc4a4O88343 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Gm27742-201ENSMUST00000184667 60 ntBASIC19.65■□□□□ 0.74
Slc4a4O88343 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc4a4O88343 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.65■□□□□ 0.74
Slc4a4O88343 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc4a4O88343 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.64■□□□□ 0.74
Slc4a4O88343 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc4a4O88343 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.64■□□□□ 0.73
Slc4a4O88343 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Slc4a4O88343 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc4a4O88343 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Slc4a4O88343 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.63■□□□□ 0.73
Slc4a4O88343 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.63■□□□□ 0.73
Slc4a4O88343 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Slc4a4O88343 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.63■□□□□ 0.73
Slc4a4O88343 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc4a4O88343 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc4a4O88343 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Slc4a4O88343 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.62■□□□□ 0.73
Slc4a4O88343 Gm15794-201ENSMUST00000120182 631 ntBASIC19.62■□□□□ 0.73
Slc4a4O88343 Olfr129-201ENSMUST00000122318 993 ntBASIC19.62■□□□□ 0.73
Slc4a4O88343 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.62■□□□□ 0.73
Slc4a4O88343 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc4a4O88343 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms