Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ttc3O88196 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ttc3O88196 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.43■□□□□ 0.38
Ttc3O88196 Gm18733-201ENSMUST00000173950 856 ntBASIC17.43■□□□□ 0.38
Ttc3O88196 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc3O88196 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Gm7506-201ENSMUST00000207758 815 ntBASIC17.42■□□□□ 0.38
Ttc3O88196 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.42■□□□□ 0.38
Ttc3O88196 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ttc3O88196 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Ttc3O88196 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ttc3O88196 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ttc3O88196 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.42■□□□□ 0.38
Ttc3O88196 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.42■□□□□ 0.38
Ttc3O88196 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.42■□□□□ 0.38
Ttc3O88196 Mir5126-201ENSMUST00000175513 77 ntBASIC17.42■□□□□ 0.38
Ttc3O88196 Rps4l-201ENSMUST00000071745 943 ntBASIC17.42■□□□□ 0.38
Ttc3O88196 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc3O88196 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.41■□□□□ 0.38
Ttc3O88196 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.41■□□□□ 0.38
Ttc3O88196 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.41■□□□□ 0.38
Ttc3O88196 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.41■□□□□ 0.38
Ttc3O88196 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.41■□□□□ 0.38
Ttc3O88196 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ttc3O88196 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc3O88196 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.4■□□□□ 0.38
Ttc3O88196 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Ttc3O88196 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ttc3O88196 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Ttc3O88196 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Ttc3O88196 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.4■□□□□ 0.38
Ttc3O88196 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ttc3O88196 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.4■□□□□ 0.38
Ttc3O88196 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ttc3O88196 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.4■□□□□ 0.38
Ttc3O88196 Gm25745-201ENSMUST00000174945 133 ntBASIC17.4■□□□□ 0.38
Ttc3O88196 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.4■□□□□ 0.38
Ttc3O88196 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ttc3O88196 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.4■□□□□ 0.38
Ttc3O88196 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.4■□□□□ 0.38
Ttc3O88196 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ttc3O88196 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.39■□□□□ 0.37
Ttc3O88196 Gm15165-201ENSMUST00000118140 502 ntBASIC17.39■□□□□ 0.37
Ttc3O88196 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.39■□□□□ 0.37
Ttc3O88196 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ttc3O88196 Gm13884-201ENSMUST00000118103 829 ntBASIC17.39■□□□□ 0.37
Ttc3O88196 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.39■□□□□ 0.37
Ttc3O88196 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.39■□□□□ 0.37
Ttc3O88196 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms