Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pdlim1O70400 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pdlim1O70400 Gm23634-201ENSMUST00000175071 91 ntBASIC16.46■□□□□ 0.23
Pdlim1O70400 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdlim1O70400 Gm18421-201ENSMUST00000204122 625 ntBASIC16.46■□□□□ 0.23
Pdlim1O70400 Gm5587-201ENSMUST00000206270 674 ntBASIC16.46■□□□□ 0.23
Pdlim1O70400 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim1O70400 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pdlim1O70400 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pdlim1O70400 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.45■□□□□ 0.22
Pdlim1O70400 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pdlim1O70400 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pdlim1O70400 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.45■□□□□ 0.22
Pdlim1O70400 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pdlim1O70400 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pdlim1O70400 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pdlim1O70400 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim1O70400 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pdlim1O70400 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdlim1O70400 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdlim1O70400 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdlim1O70400 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.44■□□□□ 0.22
Pdlim1O70400 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.44■□□□□ 0.22
Pdlim1O70400 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pdlim1O70400 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pdlim1O70400 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 AA414768-201ENSMUST00000121924 1257 ntBASIC16.43■□□□□ 0.22
Pdlim1O70400 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.43■□□□□ 0.22
Pdlim1O70400 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pdlim1O70400 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pdlim1O70400 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pdlim1O70400 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pdlim1O70400 Gm13216-201ENSMUST00000117145 591 ntBASIC16.42■□□□□ 0.22
Pdlim1O70400 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms