Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Matn3O35701 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Matn3O35701 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
Matn3O35701 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Matn3O35701 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.2■□□□□ 0.02
Matn3O35701 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Matn3O35701 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Matn3O35701 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.2■□□□□ 0.02
Matn3O35701 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.2■□□□□ 0.02
Matn3O35701 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Matn3O35701 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.19■□□□□ 0.02
Matn3O35701 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Matn3O35701 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Matn3O35701 Nespas-201ENSMUST00000143738 1083 ntBASIC15.19■□□□□ 0.02
Matn3O35701 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Mir2861-201ENSMUST00000175539 82 ntBASIC15.19■□□□□ 0.02
Matn3O35701 Gm6420-201ENSMUST00000193885 723 ntBASIC15.19■□□□□ 0.02
Matn3O35701 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Matn3O35701 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Matn3O35701 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Matn3O35701 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Matn3O35701 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.18■□□□□ 0.02
Matn3O35701 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.18■□□□□ 0.02
Matn3O35701 Gm7514-201ENSMUST00000209475 934 ntBASIC15.18■□□□□ 0.02
Matn3O35701 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.18■□□□□ 0.02
Matn3O35701 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Matn3O35701 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Matn3O35701 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Prob1-201ENSMUST00000097619 3021 ntBASIC15.18■□□□□ 0.02
Matn3O35701 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Matn3O35701 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Matn3O35701 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Matn3O35701 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Matn3O35701 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms