Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.91■□□□□ 0.46
Nr1i3O35627 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.91■□□□□ 0.46
Nr1i3O35627 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nr1i3O35627 Actl10-202ENSMUST00000226583 1501 ntBASIC17.91■□□□□ 0.46
Nr1i3O35627 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1i3O35627 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nr1i3O35627 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.91■□□□□ 0.46
Nr1i3O35627 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.9■□□□□ 0.46
Nr1i3O35627 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nr1i3O35627 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1i3O35627 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nr1i3O35627 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nr1i3O35627 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nr1i3O35627 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Mir5122-201ENSMUST00000175004 89 ntBASIC17.89■□□□□ 0.45
Nr1i3O35627 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.89■□□□□ 0.45
Nr1i3O35627 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nr1i3O35627 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nr1i3O35627 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1i3O35627 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.88■□□□□ 0.45
Nr1i3O35627 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.88■□□□□ 0.45
Nr1i3O35627 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nr1i3O35627 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.88■□□□□ 0.45
Nr1i3O35627 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.88■□□□□ 0.45
Nr1i3O35627 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nr1i3O35627 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1i3O35627 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nr1i3O35627 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1i3O35627 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.87■□□□□ 0.45
Nr1i3O35627 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms