Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Npc1O35604 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Npc1O35604 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.27■□□□□ 0.2
Npc1O35604 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Gm5587-201ENSMUST00000206270 674 ntBASIC16.27■□□□□ 0.2
Npc1O35604 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.27■□□□□ 0.2
Npc1O35604 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Npc1O35604 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Npc1O35604 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Npc1O35604 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Npc1O35604 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Npc1O35604 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.26■□□□□ 0.19
Npc1O35604 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Npc1O35604 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Npc1O35604 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Npc1O35604 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Npc1O35604 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Npc1O35604 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Gm27000-201ENSMUST00000182943 842 ntBASIC16.25■□□□□ 0.19
Npc1O35604 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.25■□□□□ 0.19
Npc1O35604 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Npc1O35604 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.25■□□□□ 0.19
Npc1O35604 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Npc1O35604 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Npc1O35604 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.24■□□□□ 0.19
Npc1O35604 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.24■□□□□ 0.19
Npc1O35604 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Npc1O35604 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Npc1O35604 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.24■□□□□ 0.19
Npc1O35604 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Npc1O35604 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Npc1O35604 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Npc1O35604 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Npc1O35604 Gm6345-202ENSMUST00000180900 204 ntBASIC16.23■□□□□ 0.19
Npc1O35604 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.23■□□□□ 0.19
Npc1O35604 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Npc1O35604 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.23■□□□□ 0.19
Npc1O35604 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms