Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.88■□□□□ 0.13
Clk3O35492 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Clk3O35492 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Clk3O35492 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clk3O35492 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.88■□□□□ 0.13
Clk3O35492 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.88■□□□□ 0.13
Clk3O35492 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clk3O35492 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Clk3O35492 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Clk3O35492 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.87■□□□□ 0.13
Clk3O35492 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.87■□□□□ 0.13
Clk3O35492 Timm23-208ENSMUST00000226683 750 ntBASIC15.87■□□□□ 0.13
Clk3O35492 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.87■□□□□ 0.13
Clk3O35492 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Clk3O35492 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clk3O35492 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.87■□□□□ 0.13
Clk3O35492 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.87■□□□□ 0.13
Clk3O35492 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Clk3O35492 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.86■□□□□ 0.13
Clk3O35492 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.86■□□□□ 0.13
Clk3O35492 Gm715-201ENSMUST00000117865 831 ntBASIC15.86■□□□□ 0.13
Clk3O35492 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.86■□□□□ 0.13
Clk3O35492 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.86■□□□□ 0.13
Clk3O35492 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.86■□□□□ 0.13
Clk3O35492 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Clk3O35492 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Clk3O35492 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.86■□□□□ 0.13
Clk3O35492 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clk3O35492 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Clk3O35492 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Clk3O35492 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Clk3O35492 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.85■□□□□ 0.13
Clk3O35492 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.85■□□□□ 0.13
Clk3O35492 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.85■□□□□ 0.13
Clk3O35492 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Clk3O35492 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Clk3O35492 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.85■□□□□ 0.13
Clk3O35492 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clk3O35492 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clk3O35492 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.84■□□□□ 0.13
Clk3O35492 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms