Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col15a1O35206 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.34■■□□□ 1.01
Col15a1O35206 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.34■■□□□ 1.01
Col15a1O35206 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Gm4995-201ENSMUST00000117247 432 ntBASIC21.34■■□□□ 1.01
Col15a1O35206 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.34■■□□□ 1.01
Col15a1O35206 Gm15173-201ENSMUST00000122049 433 ntBASIC21.34■■□□□ 1.01
Col15a1O35206 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.34■■□□□ 1.01
Col15a1O35206 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.34■■□□□ 1.01
Col15a1O35206 Gm15590-201ENSMUST00000078419 552 ntBASIC21.34■■□□□ 1.01
Col15a1O35206 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Col15a1O35206 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col15a1O35206 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.33■■□□□ 1.01
Col15a1O35206 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col15a1O35206 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Col15a1O35206 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col15a1O35206 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col15a1O35206 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.33■■□□□ 1
Col15a1O35206 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.33■■□□□ 1
Col15a1O35206 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Col15a1O35206 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.33■■□□□ 1
Col15a1O35206 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.33■■□□□ 1
Col15a1O35206 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.33■■□□□ 1
Col15a1O35206 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1
Col15a1O35206 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.33■■□□□ 1
Col15a1O35206 Gm6089-201ENSMUST00000197666 938 ntBASIC21.33■■□□□ 1
Col15a1O35206 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
Col15a1O35206 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.33■■□□□ 1
Col15a1O35206 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.33■■□□□ 1
Col15a1O35206 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Col15a1O35206 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col15a1O35206 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Col15a1O35206 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Col15a1O35206 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col15a1O35206 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col15a1O35206 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Col15a1O35206 Gm4459-201ENSMUST00000118750 468 ntBASIC21.32■■□□□ 1
Col15a1O35206 Gm15467-201ENSMUST00000120582 445 ntBASIC21.32■■□□□ 1
Col15a1O35206 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.32■■□□□ 1
Col15a1O35206 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.32■■□□□ 1
Col15a1O35206 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.32■■□□□ 1
Col15a1O35206 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.32■■□□□ 1
Col15a1O35206 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col15a1O35206 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col15a1O35206 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col15a1O35206 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col15a1O35206 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.31■■□□□ 1
Col15a1O35206 Gm8097-201ENSMUST00000117903 829 ntBASIC21.31■■□□□ 1
Col15a1O35206 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.31■■□□□ 1
Col15a1O35206 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col15a1O35206 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.31■■□□□ 1
Col15a1O35206 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.31■■□□□ 1
Col15a1O35206 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Col15a1O35206 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Col15a1O35206 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col15a1O35206 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.3■■□□□ 1
Col15a1O35206 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.3■■□□□ 1
Col15a1O35206 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Col15a1O35206 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col15a1O35206 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.29■■□□□ 1
Col15a1O35206 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 Gm12497-201ENSMUST00000138778 237 ntBASIC21.29■■□□□ 1
Col15a1O35206 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
Col15a1O35206 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Col15a1O35206 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col15a1O35206 AV026068-213ENSMUST00000223675 1171 ntBASIC21.29■■□□□ 1
Col15a1O35206 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms