Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc180J3QNE4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC30.3■■■□□ 2.44
Ccdc180J3QNE4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 Gm8000-201ENSMUST00000188378 592 ntBASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 AC154757.1-201ENSMUST00000228289 336 ntBASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 Gm11620-201ENSMUST00000118770 1845 ntBASIC30.29■■■□□ 2.44
Ccdc180J3QNE4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
Ccdc180J3QNE4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc180J3QNE4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc180J3QNE4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc180J3QNE4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Gm13418-201ENSMUST00000119097 944 ntBASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Gm10175-201ENSMUST00000086013 645 ntBASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 Gm9172-201ENSMUST00000212092 954 ntBASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 AV026068-213ENSMUST00000223675 1171 ntBASIC30.27■■■□□ 2.44
Ccdc180J3QNE4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC30.26■■■□□ 2.44
Ccdc180J3QNE4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Ccdc180J3QNE4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Ccdc180J3QNE4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Ccdc180J3QNE4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Gm37584-201ENSMUST00000193595 1290 ntBASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc180J3QNE4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Gm5837-201ENSMUST00000191844 1369 ntBASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ccdc180J3QNE4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 Gm15173-201ENSMUST00000122049 433 ntBASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc180J3QNE4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Gm18856-201ENSMUST00000178096 1374 ntBASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Gm11780-201ENSMUST00000136880 516 ntBASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 AC159093.1-201ENSMUST00000227779 380 ntBASIC30.23■■■□□ 2.43
Ccdc180J3QNE4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Gm6089-201ENSMUST00000197666 938 ntBASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Gm43935-201ENSMUST00000203569 1050 ntBASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC30.22■■■□□ 2.43
Ccdc180J3QNE4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC30.22■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms