Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Gm12350-201ENSMUST00000121208 462 ntBASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sh3tc1G3X9F6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Sh3tc1G3X9F6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Gm25745-201ENSMUST00000174945 133 ntBASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3tc1G3X9F6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Mir5126-201ENSMUST00000175513 77 ntBASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3tc1G3X9F6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3tc1G3X9F6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3tc1G3X9F6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3tc1G3X9F6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3tc1G3X9F6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3tc1G3X9F6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms