Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Gm5656-201ENSMUST00000171020 1096 ntBASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx1-1G3UXB3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Gm12428-201ENSMUST00000119844 727 ntBASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx1-1G3UXB3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Nkx1-1G3UXB3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx1-1G3UXB3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx1-1G3UXB3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx1-1G3UXB3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Gm7222-201ENSMUST00000117512 906 ntBASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Gm7506-201ENSMUST00000207758 815 ntBASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 AC125539.1-201ENSMUST00000227423 622 ntBASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Gm15222-202ENSMUST00000228667 1726 ntBASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nkx1-1G3UXB3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx1-1G3UXB3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms