Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.12■□□□□ 0.33
Atf6F6VAN0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atf6F6VAN0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Gm7370-201ENSMUST00000219471 767 ntBASIC17.11■□□□□ 0.33
Atf6F6VAN0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atf6F6VAN0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atf6F6VAN0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Gm2274-201ENSMUST00000184539 609 ntBASIC17.09■□□□□ 0.33
Atf6F6VAN0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.09■□□□□ 0.33
Atf6F6VAN0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf6F6VAN0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms