Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Gm11594-201ENSMUST00000122313 162 ntBASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
R3hdm1E9Q9Q2 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm1E9Q9Q2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm1E9Q9Q2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm1E9Q9Q2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm1E9Q9Q2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms