Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm27742-201ENSMUST00000184667 60 ntBASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Ank2-226ENSMUST00000189368 339 ntBASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb9E9Q5G2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.6■□□□□ 0.73
Pcdhb9E9Q5G2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Gm10819-201ENSMUST00000099988 561 ntBASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb9E9Q5G2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhb9E9Q5G2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb9E9Q5G2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb9E9Q5G2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb9E9Q5G2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb9E9Q5G2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb9E9Q5G2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms