Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srp54bE9PXC0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Srp54bE9PXC0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Srp54bE9PXC0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Gm34391-201ENSMUST00000203706 907 ntBASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Birc2-201ENSMUST00000054878 378 ntBASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srp54bE9PXC0 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Gm12895-201ENSMUST00000122214 226 ntBASIC16.38■□□□□ 0.21
Srp54bE9PXC0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srp54bE9PXC0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srp54bE9PXC0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.36■□□□□ 0.21
Srp54bE9PXC0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srp54bE9PXC0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms