Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Gm25925-201ENSMUST00000158314 306 ntBASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clrn2B2RVW2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Gm1401-201ENSMUST00000122048 772 ntBASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clrn2B2RVW2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.27■□□□□ 0.68
Clrn2B2RVW2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clrn2B2RVW2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.27■□□□□ 0.67
Clrn2B2RVW2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.27■□□□□ 0.67
Clrn2B2RVW2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clrn2B2RVW2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Gm10060-201ENSMUST00000212002 111 ntBASIC19.26■□□□□ 0.67
Clrn2B2RVW2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clrn2B2RVW2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clrn2B2RVW2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Gm37935-201ENSMUST00000192012 982 ntBASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clrn2B2RVW2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms