Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.52□□□□□ -0.25
Chd6A3KFM7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.52□□□□□ -0.25
Chd6A3KFM7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.52□□□□□ -0.25
Chd6A3KFM7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd6A3KFM7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm13186-201ENSMUST00000118031 316 ntBASIC13.51□□□□□ -0.25
Chd6A3KFM7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm25948-201ENSMUST00000175334 112 ntBASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.51□□□□□ -0.25
Chd6A3KFM7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.51□□□□□ -0.25
Chd6A3KFM7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd6A3KFM7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Gm7222-201ENSMUST00000117512 906 ntBASIC13.5□□□□□ -0.25
Chd6A3KFM7 Gm27306-201ENSMUST00000183970 107 ntBASIC13.5□□□□□ -0.25
Chd6A3KFM7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.5□□□□□ -0.25
Chd6A3KFM7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd6A3KFM7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.49□□□□□ -0.25
Chd6A3KFM7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.49□□□□□ -0.25
Chd6A3KFM7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.49□□□□□ -0.25
Chd6A3KFM7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd6A3KFM7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chd6A3KFM7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd6A3KFM7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.48□□□□□ -0.25
Chd6A3KFM7 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.48□□□□□ -0.25
Chd6A3KFM7 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.48□□□□□ -0.25
Chd6A3KFM7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd6A3KFM7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chd6A3KFM7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms