Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col6a4A2AX52 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a4A2AX52 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.01□□□□□ -0.17
Col6a4A2AX52 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a4A2AX52 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.01□□□□□ -0.17
Col6a4A2AX52 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.01□□□□□ -0.17
Col6a4A2AX52 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a4A2AX52 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a4A2AX52 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col6a4A2AX52 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Col6a4A2AX52 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14□□□□□ -0.17
Col6a4A2AX52 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14□□□□□ -0.17
Col6a4A2AX52 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14□□□□□ -0.17
Col6a4A2AX52 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col6a4A2AX52 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a4A2AX52 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Gm44430-201ENSMUST00000203376 995 ntBASIC13.99□□□□□ -0.17
Col6a4A2AX52 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a4A2AX52 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a4A2AX52 Gm14494-201ENSMUST00000118786 435 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms