Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn1aA2APX8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.42■□□□□ 0.38
Scn1aA2APX8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn1aA2APX8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Gm34391-201ENSMUST00000203706 907 ntBASIC17.41■□□□□ 0.38
Scn1aA2APX8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.41■□□□□ 0.38
Scn1aA2APX8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.41■□□□□ 0.38
Scn1aA2APX8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn1aA2APX8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn1aA2APX8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Scn1aA2APX8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.39■□□□□ 0.37
Scn1aA2APX8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn1aA2APX8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn1aA2APX8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms