Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Gm5643-201ENSMUST00000117081 966 ntBASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Il3ra-202ENSMUST00000223589 738 ntBASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-1A0N8R1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Gm12527-201ENSMUST00000117967 564 ntBASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Gm7638-201ENSMUST00000121348 967 ntBASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-1A0N8R1 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-1A0N8R1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms