Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Mir6982-201ENSMUST00000184354 68 ntBASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Gm3375-201ENSMUST00000203929 796 ntBASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Gm9731-201ENSMUST00000209480 747 ntBASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Gm10252-201ENSMUST00000209541 832 ntBASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Gm30025-201ENSMUST00000218555 728 ntBASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv17A0A140T8P8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Gm27463-201ENSMUST00000183569 57 ntBASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv17A0A140T8P8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv17A0A140T8P8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv17A0A140T8P8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms