Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm2274-201ENSMUST00000184539 609 ntBASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trbv13-2A0A140T8N6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trbv13-2A0A140T8N6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm15565-201ENSMUST00000118890 427 ntBASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm13559-201ENSMUST00000120476 863 ntBASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trbv13-2A0A140T8N6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trbv13-2A0A140T8N6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms