Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Mir1199-201ENSMUST00000117015 119 ntBASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc194A0A140LIT1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Il3ra-202ENSMUST00000223589 738 ntBASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Timm23-208ENSMUST00000226683 750 ntBASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc194A0A140LIT1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc194A0A140LIT1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc194A0A140LIT1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccdc194A0A140LIT1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms