Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhgb8A0A140LI48 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhgb8A0A140LI48 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhgb8A0A140LI48 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Gm12382-201ENSMUST00000122005 922 ntBASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Gm37292-201ENSMUST00000192062 758 ntBASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Gm42545-201ENSMUST00000202755 922 ntBASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhgb8A0A140LI48 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Pcdhgb8A0A140LI48 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhgb8A0A140LI48 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Gm11643-201ENSMUST00000119578 864 ntBASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Mir2861-201ENSMUST00000175539 82 ntBASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Gm21814-202ENSMUST00000203277 873 ntBASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Odf3b-204ENSMUST00000227834 930 ntBASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhgb8A0A140LI48 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhgb8A0A140LI48 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms