Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm13401-201ENSMUST00000117074 291 ntBASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm14117-201ENSMUST00000122417 843 ntBASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4-3A0A0B4J1K1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Asic1-205ENSMUST00000228185 1818 ntBASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav4-3A0A0B4J1K1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm11643-201ENSMUST00000119578 864 ntBASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mir2861-201ENSMUST00000175539 82 ntBASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm9988-201ENSMUST00000069786 435 ntBASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4-3A0A0B4J1K1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav4-3A0A0B4J1K1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms