Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm6365-201ENSMUST00000054711 744 ntBASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Mtag2-201ENSMUST00000058665 714 ntBASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm10493-201ENSMUST00000097270 612 ntBASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv20A0A0B4J1H5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm10033-202ENSMUST00000211874 928 ntBASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv20A0A0B4J1H5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm6211-202ENSMUST00000167849 925 ntBASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv20A0A0B4J1H5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms