Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm21559-201ENSMUST00000220638 855 ntBASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm8587-201ENSMUST00000076538 843 ntBASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh7A0A0A6YY83 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm29707-201ENSMUST00000196325 491 ntBASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm18421-201ENSMUST00000204122 625 ntBASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh7A0A0A6YY83 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm10231-201ENSMUST00000181584 441 ntBASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm10175-202ENSMUST00000208752 441 ntBASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh7A0A0A6YY83 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm10013-201ENSMUST00000106074 672 ntBASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdh7A0A0A6YY83 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms