Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8n-2A0A075B633 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Mir5131-201ENSMUST00000175426 93 ntBASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8n-2A0A075B633 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Gm1401-201ENSMUST00000122048 772 ntBASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Gm25925-201ENSMUST00000158314 306 ntBASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Gm10060-201ENSMUST00000212002 111 ntBASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8n-2A0A075B633 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Gm27525-201ENSMUST00000184465 107 ntBASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav8n-2A0A075B633 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8n-2A0A075B633 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms