Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-1A0A075B5Z8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm8495-201ENSMUST00000188740 694 ntBASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-1A0A075B5Z8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-1A0A075B5Z8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6-1A0A075B5Z8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-1A0A075B5Z8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms