Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
RPA3P35244 RN7SL652P-201ENST00000577769 300 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.56□□□□□ -1.68
RPA3P35244 AC090181.2-201ENST00000602975 672 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AC098935.2-201ENST00000604222 466 ntBASIC4.56□□□□□ -1.68
RPA3P35244 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.56□□□□□ -1.68
RPA3P35244 AL138721.1-201ENST00000616756 179 ntBASIC4.56□□□□□ -1.68
RPA3P35244 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.56□□□□□ -1.68
RPA3P35244 MTND5P23-201ENST00000430812 1655 ntBASIC4.56□□□□□ -1.68
RPA3P35244 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.56□□□□□ -1.68
RPA3P35244 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
RPA3P35244 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 AC105074.1-201ENST00000623380 3095 ntBASIC4.56□□□□□ -1.68
RPA3P35244 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
RPA3P35244 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RPA3P35244 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPA3P35244 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.55□□□□□ -1.68
RPA3P35244 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RPA3P35244 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPA3P35244 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
RPA3P35244 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RPA3P35244 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPA3P35244 Z98745.1-201ENST00000402553 494 ntBASIC4.55□□□□□ -1.68
RPA3P35244 RNU2-22P-201ENST00000411266 212 ntBASIC4.55□□□□□ -1.68
RPA3P35244 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.55□□□□□ -1.68
RPA3P35244 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.55□□□□□ -1.68
RPA3P35244 CDY14P-201ENST00000431260 1014 ntBASIC4.55□□□□□ -1.68
RPA3P35244 CDY12P-201ENST00000440679 1015 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.55□□□□□ -1.68
RPA3P35244 CDY13P-201ENST00000445813 1015 ntBASIC4.55□□□□□ -1.68
RPA3P35244 CDY23P-201ENST00000451661 1014 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AC239798.3-201ENST00000454459 408 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AC011005.3-201ENST00000491624 395 ntBASIC4.55□□□□□ -1.68
RPA3P35244 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.55□□□□□ -1.68
RPA3P35244 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.55□□□□□ -1.68
RPA3P35244 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.55□□□□□ -1.68
RPA3P35244 MIR4270-201ENST00000581799 70 ntBASIC4.55□□□□□ -1.68
RPA3P35244 ADAD1P2-201ENST00000588476 646 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AC015813.4-201ENST00000610469 179 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AC009237.17-201ENST00000618111 748 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.55□□□□□ -1.68
RPA3P35244 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RPA3P35244 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPA3P35244 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPA3P35244 AC068254.2-201ENST00000623938 3577 ntBASIC4.55□□□□□ -1.68
RPA3P35244 MTCO1P46-201ENST00000451639 1491 ntBASIC4.55□□□□□ -1.68
RPA3P35244 CR382285.2-201ENST00000624662 1495 ntBASIC4.55□□□□□ -1.68
RPA3P35244 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPA3P35244 NXPH1-205ENST00000602349 1953 ntBASIC4.54□□□□□ -1.68
RPA3P35244 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPA3P35244 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPA3P35244 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPA3P35244 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 AC006971.1-201ENST00000407916 4486 ntBASIC4.54□□□□□ -1.68
RPA3P35244 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.54□□□□□ -1.68
RPA3P35244 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPA3P35244 AL590240.1-201ENST00000334118 313 ntBASIC4.54□□□□□ -1.68
RPA3P35244 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPA3P35244 MIR137-201ENST00000385223 102 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AL078604.1-201ENST00000404609 466 ntBASIC4.54□□□□□ -1.68
RPA3P35244 FCF1P5-201ENST00000406490 482 ntBASIC4.54□□□□□ -1.68
RPA3P35244 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 RNU6-233P-201ENST00000410845 141 ntBASIC4.54□□□□□ -1.68
RPA3P35244 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.54□□□□□ -1.68
RPA3P35244 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.54□□□□□ -1.68
RPA3P35244 RPL23AP25-201ENST00000430973 463 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AL049745.1-201ENST00000433953 286 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AC097523.2-201ENST00000435551 652 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AC011753.3-201ENST00000443436 406 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.54□□□□□ -1.68
RPA3P35244 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.54□□□□□ -1.68
RPA3P35244 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.54□□□□□ -1.68
RPA3P35244 AC098583.1-201ENST00000480875 255 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.54□□□□□ -1.68
RPA3P35244 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.54□□□□□ -1.68
RPA3P35244 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.54□□□□□ -1.68
RPA3P35244 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 AC125612.1-201ENST00000547580 377 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AC069240.1-201ENST00000548774 375 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AL110118.1-201ENST00000553543 400 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.54□□□□□ -1.68
RPA3P35244 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 AC105129.1-201ENST00000560250 297 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 AC015849.6-201ENST00000605454 474 ntBASIC4.54□□□□□ -1.68
RPA3P35244 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPA3P35244 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.54□□□□□ -1.68
RPA3P35244 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.54□□□□□ -1.68
RPA3P35244 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RPA3P35244 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPA3P35244 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RPA3P35244 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPA3P35244 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RPA3P35244 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.53□□□□□ -1.68
RPA3P35244 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.53□□□□□ -1.68
RPA3P35244 AC120338.1-201ENST00000625074 1541 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms