Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 AC073136.1-201ENST00000449426 2884 ntBASIC5.12□□□□□ -1.59
LDB2O43679 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 SNORA2.3-201ENST00000383920 135 ntBASIC5.12□□□□□ -1.59
LDB2O43679 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LDB2O43679 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LDB2O43679 RN7SKP126-201ENST00000411143 300 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.12□□□□□ -1.59
LDB2O43679 AC092447.3-201ENST00000426027 686 ntBASIC5.12□□□□□ -1.59
LDB2O43679 COX6CP13-201ENST00000428703 226 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.12□□□□□ -1.59
LDB2O43679 BX323845.1-201ENST00000432417 179 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.12□□□□□ -1.59
LDB2O43679 AC092647.2-201ENST00000452998 253 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AL139824.2-201ENST00000458731 1095 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AC092691.2-201ENST00000461787 803 ntBASIC5.12□□□□□ -1.59
LDB2O43679 SYT14P1-201ENST00000481459 721 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AC093270.2-201ENST00000486157 792 ntBASIC5.12□□□□□ -1.59
LDB2O43679 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 AC008427.1-201ENST00000503102 655 ntBASIC5.12□□□□□ -1.59
LDB2O43679 ENPP7P11-201ENST00000505915 627 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AC021146.7-201ENST00000509604 775 ntBASIC5.12□□□□□ -1.59
LDB2O43679 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.12□□□□□ -1.59
LDB2O43679 SNORA70.11-201ENST00000515987 138 ntBASIC5.12□□□□□ -1.59
LDB2O43679 SNORA70.13-201ENST00000516116 138 ntBASIC5.12□□□□□ -1.59
LDB2O43679 BUD31P1-201ENST00000521828 359 ntBASIC5.12□□□□□ -1.59
LDB2O43679 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.12□□□□□ -1.59
LDB2O43679 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.12□□□□□ -1.59
LDB2O43679 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.12□□□□□ -1.59
LDB2O43679 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 AC019322.1-201ENST00000571869 389 ntBASIC5.12□□□□□ -1.59
LDB2O43679 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.12□□□□□ -1.59
LDB2O43679 AC073137.1-201ENST00000605636 634 ntBASIC5.12□□□□□ -1.59
LDB2O43679 AC009974.1-201ENST00000608881 455 ntBASIC5.12□□□□□ -1.59
LDB2O43679 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.12□□□□□ -1.59
LDB2O43679 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 AP005432.1-201ENST00000580891 3485 ntBASIC5.12□□□□□ -1.59
LDB2O43679 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
LDB2O43679 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
LDB2O43679 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.11□□□□□ -1.59
LDB2O43679 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 AC234772.1-201ENST00000377927 937 ntBASIC5.11□□□□□ -1.59
LDB2O43679 RN7SKP114-201ENST00000410327 279 ntBASIC5.11□□□□□ -1.59
LDB2O43679 RN7SKP273-201ENST00000411392 314 ntBASIC5.11□□□□□ -1.59
LDB2O43679 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.11□□□□□ -1.59
LDB2O43679 NPM1P22-201ENST00000427761 952 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC092447.2-201ENST00000435487 669 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AL138787.1-202ENST00000437804 898 ntBASIC5.11□□□□□ -1.59
LDB2O43679 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.11□□□□□ -1.59
LDB2O43679 RPL6P5-201ENST00000445678 828 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC044797.1-201ENST00000445744 679 ntBASIC5.11□□□□□ -1.59
LDB2O43679 RPL7P61-201ENST00000451721 751 ntBASIC5.11□□□□□ -1.59
LDB2O43679 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.11□□□□□ -1.59
LDB2O43679 RN7SL443P-201ENST00000464331 290 ntBASIC5.11□□□□□ -1.59
LDB2O43679 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.11□□□□□ -1.59
LDB2O43679 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.11□□□□□ -1.59
LDB2O43679 AC020898.1-201ENST00000474167 787 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC068587.2-201ENST00000478386 781 ntBASIC5.11□□□□□ -1.59
LDB2O43679 RPSAP50-201ENST00000481955 852 ntBASIC5.11□□□□□ -1.59
LDB2O43679 RN7SL441P-201ENST00000492388 296 ntBASIC5.11□□□□□ -1.59
LDB2O43679 NDUFA5P12-201ENST00000503796 343 ntBASIC5.11□□□□□ -1.59
LDB2O43679 SUMO2P5-201ENST00000506790 245 ntBASIC5.11□□□□□ -1.59
LDB2O43679 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.11□□□□□ -1.59
LDB2O43679 AC138832.1-201ENST00000522871 556 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AP002373.2-201ENST00000541631 1060 ntBASIC5.11□□□□□ -1.59
LDB2O43679 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LDB2O43679 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.11□□□□□ -1.59
LDB2O43679 AC008126.1-201ENST00000549019 480 ntBASIC5.11□□□□□ -1.59
LDB2O43679 HMGN2P6-201ENST00000551091 273 ntBASIC5.11□□□□□ -1.59
LDB2O43679 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 AC006349.1-201ENST00000555526 235 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC104229.1-201ENST00000561364 255 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC023825.1-201ENST00000566704 1030 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AGGF1P5-201ENST00000567900 919 ntBASIC5.11□□□□□ -1.59
LDB2O43679 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.11□□□□□ -1.59
LDB2O43679 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.11□□□□□ -1.59
LDB2O43679 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.11□□□□□ -1.59
LDB2O43679 MTCO2P2-201ENST00000591258 225 ntBASIC5.11□□□□□ -1.59
LDB2O43679 OR7A19P-201ENST00000608051 733 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms