Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.18□□□□□ -1.74
ACTBP60709 AC104651.2-201ENST00000447549 528 ntBASIC4.18□□□□□ -1.74
ACTBP60709 MYO5BP2-201ENST00000449815 1277 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AL606490.1-201ENST00000452266 765 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AC026348.1-201ENST00000462549 1053 ntBASIC4.18□□□□□ -1.74
ACTBP60709 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTBP60709 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 RPL23AP37-201ENST00000479658 549 ntBASIC4.18□□□□□ -1.74
ACTBP60709 HAUS1P1-201ENST00000505275 832 ntBASIC4.18□□□□□ -1.74
ACTBP60709 PGAM1P13-201ENST00000507497 754 ntBASIC4.18□□□□□ -1.74
ACTBP60709 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
ACTBP60709 AC134698.5-201ENST00000519444 336 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.18□□□□□ -1.74
ACTBP60709 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 AC087477.6-201ENST00000559595 843 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AC007225.2-201ENST00000562529 256 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.18□□□□□ -1.74
ACTBP60709 AC018552.3-201ENST00000567416 561 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTBP60709 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTBP60709 IMMP1LP3-201ENST00000604197 224 ntBASIC4.18□□□□□ -1.74
ACTBP60709 OR6R2P-201ENST00000609216 300 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTBP60709 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.18□□□□□ -1.74
ACTBP60709 AC008115.4-201ENST00000619780 775 ntBASIC4.18□□□□□ -1.74
ACTBP60709 AC005086.4-201ENST00000623065 213 ntBASIC4.18□□□□□ -1.74
ACTBP60709 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTBP60709 EOGT-210ENST00000615922 1931 ntBASIC4.18□□□□□ -1.74
ACTBP60709 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.18□□□□□ -1.74
ACTBP60709 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
ACTBP60709 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTBP60709 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.18□□□□□ -1.74
ACTBP60709 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ACTBP60709 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 AC009951.1-201ENST00000623674 2614 ntBASIC4.17□□□□□ -1.74
ACTBP60709 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ACTBP60709 PANDAR-201ENST00000629595 1506 ntBASIC4.17□□□□□ -1.74
ACTBP60709 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ACTBP60709 RNU1-20P-201ENST00000363314 162 ntBASIC4.17□□□□□ -1.74
ACTBP60709 RNU6-146P-201ENST00000384602 108 ntBASIC4.17□□□□□ -1.74
ACTBP60709 MIR921-201ENST00000401133 56 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AL391361.1-201ENST00000405580 489 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.17□□□□□ -1.74
ACTBP60709 VN1R37P-201ENST00000419096 748 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AC079355.1-201ENST00000421770 223 ntBASIC4.17□□□□□ -1.74
ACTBP60709 GTF2IP2-201ENST00000424290 697 ntBASIC4.17□□□□□ -1.74
ACTBP60709 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.17□□□□□ -1.74
ACTBP60709 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 AP002371.1-201ENST00000463604 433 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AC108022.1-201ENST00000493466 478 ntBASIC4.17□□□□□ -1.74
ACTBP60709 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ACTBP60709 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.17□□□□□ -1.74
ACTBP60709 SCARNA21.2-201ENST00000516600 166 ntBASIC4.17□□□□□ -1.74
ACTBP60709 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 OR8X1P-201ENST00000534542 869 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 AC004825.1-201ENST00000555068 586 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 RN7SL176P-201ENST00000580352 264 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.17□□□□□ -1.74
ACTBP60709 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 RPL26P30-202ENST00000602923 645 ntBASIC4.17□□□□□ -1.74
ACTBP60709 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 AC090527.3-201ENST00000619041 548 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AC019206.1-201ENST00000621938 425 ntBASIC4.17□□□□□ -1.74
ACTBP60709 AC055839.1-201ENST00000634467 498 ntBASIC4.17□□□□□ -1.74
ACTBP60709 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 ECM1P2-201ENST00000503354 1577 ntBASIC4.17□□□□□ -1.74
ACTBP60709 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ACTBP60709 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.17□□□□□ -1.74
ACTBP60709 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ACTBP60709 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTBP60709 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms