Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPL7P55-201ENST00000450522 746 ntBASIC6.51□□□□□ -1.37
MRE11P49959 PRPF38AP1-201ENST00000451976 933 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AL133351.3-201ENST00000454998 193 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 AC245028.2-201ENST00000458673 253 ntBASIC6.51□□□□□ -1.37
MRE11P49959 RPS17P11-201ENST00000474297 293 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AC004815.1-201ENST00000484185 331 ntBASIC6.51□□□□□ -1.37
MRE11P49959 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.51□□□□□ -1.37
MRE11P49959 AC015864.1-201ENST00000496512 544 ntBASIC6.51□□□□□ -1.37
MRE11P49959 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.51□□□□□ -1.37
MRE11P49959 AC092709.1-201ENST00000521355 1045 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AC122688.1-201ENST00000541494 223 ntBASIC6.51□□□□□ -1.37
MRE11P49959 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 NOP56P3-201ENST00000549457 385 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.51□□□□□ -1.37
MRE11P49959 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 AGGF1P6-201ENST00000569213 976 ntBASIC6.51□□□□□ -1.37
MRE11P49959 MTCYBP13-201ENST00000578634 1093 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AP002884.5-201ENST00000595053 1132 ntBASIC6.51□□□□□ -1.37
MRE11P49959 SNX6P1-201ENST00000601728 1224 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AC245014.3-201ENST00000618589 347 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 AC006927.2-201ENST00000639256 389 ntBASIC6.51□□□□□ -1.37
MRE11P49959 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
MRE11P49959 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.51□□□□□ -1.37
MRE11P49959 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
MRE11P49959 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 MFSD8-219ENST00000641228 2559 ntBASIC6.51□□□□□ -1.37
MRE11P49959 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.51□□□□□ -1.37
MRE11P49959 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 AC017002.4-201ENST00000604721 1525 ntBASIC6.5□□□□□ -1.37
MRE11P49959 YES1P1-201ENST00000418510 1628 ntBASIC6.5□□□□□ -1.37
MRE11P49959 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
MRE11P49959 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 Y_RNA.318-201ENST00000365131 97 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AC005042.1-201ENST00000393397 800 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AL157702.1-201ENST00000398764 426 ntBASIC6.5□□□□□ -1.37
MRE11P49959 Z86062.1-201ENST00000406773 777 ntBASIC6.5□□□□□ -1.37
MRE11P49959 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.5□□□□□ -1.37
MRE11P49959 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 AC073143.1-201ENST00000436316 395 ntBASIC6.5□□□□□ -1.37
MRE11P49959 MTCYBP29-201ENST00000436327 1006 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AL353662.1-201ENST00000439099 327 ntBASIC6.5□□□□□ -1.37
MRE11P49959 ATP5C1P1-201ENST00000441945 895 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AL358794.1-201ENST00000445689 381 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 RPL31P20-201ENST00000449593 360 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AC092155.2-201ENST00000454675 477 ntBASIC6.5□□□□□ -1.37
MRE11P49959 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.5□□□□□ -1.37
MRE11P49959 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.5□□□□□ -1.37
MRE11P49959 PRDX3P4-201ENST00000470828 747 ntBASIC6.5□□□□□ -1.37
MRE11P49959 OR5H3P-201ENST00000502817 919 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AC095052.1-201ENST00000509955 863 ntBASIC6.5□□□□□ -1.37
MRE11P49959 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 OR10V3P-201ENST00000525712 725 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 AC091078.2-201ENST00000557145 559 ntBASIC6.5□□□□□ -1.37
MRE11P49959 ZNF971P-201ENST00000562068 1249 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.5□□□□□ -1.37
MRE11P49959 AC027455.1-201ENST00000574104 594 ntBASIC6.5□□□□□ -1.37
MRE11P49959 DHFRP1-201ENST00000579682 559 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.5□□□□□ -1.37
MRE11P49959 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.5□□□□□ -1.37
MRE11P49959 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.5□□□□□ -1.37
MRE11P49959 FRG1DP-201ENST00000635586 771 ntBASIC6.5□□□□□ -1.37
MRE11P49959 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.5□□□□□ -1.37
MRE11P49959 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 AC114947.2-201ENST00000565748 2125 ntBASIC6.5□□□□□ -1.37
MRE11P49959 AL359715.3-201ENST00000569267 2123 ntBASIC6.5□□□□□ -1.37
MRE11P49959 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 AC000374.1-201ENST00000434698 1745 ntBASIC6.5□□□□□ -1.37
MRE11P49959 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MRE11P49959 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.5□□□□□ -1.37
MRE11P49959 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 AL034549.2-201ENST00000618285 3373 ntBASIC6.49□□□□□ -1.37
MRE11P49959 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 TRIM51GP-201ENST00000534741 1350 ntBASIC6.49□□□□□ -1.37
MRE11P49959 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MRE11P49959 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MRE11P49959 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 RNA5SP326-201ENST00000363209 110 ntBASIC6.49□□□□□ -1.37
MRE11P49959 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
MRE11P49959 MIR513B-201ENST00000385136 84 ntBASIC6.49□□□□□ -1.37
MRE11P49959 FAR2P2-201ENST00000413041 594 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AL139128.1-201ENST00000413921 941 ntBASIC6.49□□□□□ -1.37
MRE11P49959 UBE2V1P9-201ENST00000414760 368 ntBASIC6.49□□□□□ -1.37
MRE11P49959 LIPT1P1-201ENST00000415870 1186 ntBASIC6.49□□□□□ -1.37
MRE11P49959 AC009518.2-201ENST00000418056 731 ntBASIC6.49□□□□□ -1.37
MRE11P49959 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms