Protein–RNA interactions for Protein: Q9Z2V6

Hdac5, Histone deacetylase 5, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac5Q9Z2V6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hdac5Q9Z2V6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Hdac5Q9Z2V6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC23.84■■□□□ 1.41
Hdac5Q9Z2V6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hdac5Q9Z2V6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Hdac5Q9Z2V6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Hdac5Q9Z2V6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Hdac5Q9Z2V6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Fcho2-208ENSMUST00000224992 2964 ntBASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Hdac5Q9Z2V6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Hdac5Q9Z2V6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Gm24589-201ENSMUST00000116692 94 ntBASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 AC108846.1-201ENSMUST00000214531 513 ntBASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Dmtn-207ENSMUST00000228001 2437 ntBASIC23.8■■□□□ 1.4
Hdac5Q9Z2V6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hdac5Q9Z2V6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Shroom3-211ENSMUST00000225438 5742 ntBASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Gfra2-202ENSMUST00000227633 1480 ntBASIC23.78■■□□□ 1.4
Hdac5Q9Z2V6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms