Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac6Q9Z2V5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hdac6Q9Z2V5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Gm15467-201ENSMUST00000120582 445 ntBASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hdac6Q9Z2V5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hdac6Q9Z2V5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Gm15590-201ENSMUST00000078419 552 ntBASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hdac6Q9Z2V5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Gm15173-201ENSMUST00000122049 433 ntBASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hdac6Q9Z2V5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hdac6Q9Z2V5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Hdac6Q9Z2V5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Gm27702-201ENSMUST00000184512 56 ntBASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Gm8969-201ENSMUST00000199694 526 ntBASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms