Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm13186-201ENSMUST00000118031 316 ntBASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Nr1h3Q9Z0Y9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1h3Q9Z0Y9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1h3Q9Z0Y9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Birc2-201ENSMUST00000054878 378 ntBASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nr1h3Q9Z0Y9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1h3Q9Z0Y9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1h3Q9Z0Y9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.08■□□□□ 0.49
Nr1h3Q9Z0Y9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1h3Q9Z0Y9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms