Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cr1Q9Z0D9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cr1Q9Z0D9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cr1Q9Z0D9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cx3cr1Q9Z0D9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.17□□□□□ -0.14
Cx3cr1Q9Z0D9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms