Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Gm13216-201ENSMUST00000117145 591 ntBASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Rfx5Q9JL61 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Gm17808-201ENSMUST00000200859 894 ntBASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx5Q9JL61 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rfx5Q9JL61 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx5Q9JL61 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Gm6623-201ENSMUST00000173570 544 ntBASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx5Q9JL61 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx5Q9JL61 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfx5Q9JL61 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms