Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn5aQ9JJV9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Gm4459-201ENSMUST00000118750 468 ntBASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Gm12497-201ENSMUST00000138778 237 ntBASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn5aQ9JJV9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
Scn5aQ9JJV9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Gm12260-201ENSMUST00000122447 411 ntBASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Gm27702-201ENSMUST00000184512 56 ntBASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Psmb5-202ENSMUST00000227257 622 ntBASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Gm6550-201ENSMUST00000187574 993 ntBASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn5aQ9JJV9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.19■□□□□ 0.34
Scn5aQ9JJV9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn5aQ9JJV9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms