Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rbfox1Q9JJ43 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.25□□□□□ -0.13
Rbfox1Q9JJ43 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Gm27000-201ENSMUST00000182943 842 ntBASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rbfox1Q9JJ43 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rbfox1Q9JJ43 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rbfox1Q9JJ43 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms