Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Gm27628-201ENSMUST00000184911 107 ntBASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx2-4Q9EQM3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-4Q9EQM3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm13036-201ENSMUST00000117799 748 ntBASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.13■□□□□ 0.33
Nkx2-4Q9EQM3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Gm25911-201ENSMUST00000157621 56 ntBASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-4Q9EQM3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Gm14057-201ENSMUST00000120631 482 ntBASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-4Q9EQM3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms