Protein–RNA interactions for Protein: Q9DBF7

Cwc25, Pre-mRNA-splicing factor CWC25 homolog, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc25Q9DBF7 Gm10052-201ENSMUST00000168019 960 ntBASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Gm7729-201ENSMUST00000050143 801 ntBASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cwc25Q9DBF7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cwc25Q9DBF7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cwc25Q9DBF7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Gm13312-201ENSMUST00000119631 718 ntBASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Gm44430-201ENSMUST00000203376 995 ntBASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.53■□□□□ 0.88
Cwc25Q9DBF7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Gm15372-201ENSMUST00000120729 834 ntBASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cwc25Q9DBF7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cwc25Q9DBF7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cwc25Q9DBF7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cwc25Q9DBF7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms