Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gm13474-201ENSMUST00000122466 815 ntBASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp2aQ9DB34 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp2aQ9DB34 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp2aQ9DB34 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp2aQ9DB34 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Gm10566-201ENSMUST00000086739 996 ntBASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.44■□□□□ 0.38
Chmp2aQ9DB34 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Gm22697-201ENSMUST00000175194 63 ntBASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.43■□□□□ 0.38
Chmp2aQ9DB34 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2aQ9DB34 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms