Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco2Q9DA21 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smco2Q9DA21 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.86■□□□□ 0.61
Smco2Q9DA21 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Gm27704-201ENSMUST00000185094 107 ntBASIC18.85■□□□□ 0.61
Smco2Q9DA21 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.85■□□□□ 0.61
Smco2Q9DA21 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.84■□□□□ 0.61
Smco2Q9DA21 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smco2Q9DA21 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smco2Q9DA21 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Smco2Q9DA21 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Smco2Q9DA21 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.83■□□□□ 0.61
Smco2Q9DA21 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smco2Q9DA21 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.83■□□□□ 0.6
Smco2Q9DA21 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Gm17808-201ENSMUST00000200859 894 ntBASIC18.83■□□□□ 0.6
Smco2Q9DA21 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smco2Q9DA21 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.82■□□□□ 0.6
Smco2Q9DA21 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.82■□□□□ 0.6
Smco2Q9DA21 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco2Q9DA21 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco2Q9DA21 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.8■□□□□ 0.6
Smco2Q9DA21 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smco2Q9DA21 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Gm37722-201ENSMUST00000193757 208 ntBASIC18.8■□□□□ 0.6
Smco2Q9DA21 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smco2Q9DA21 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms